Difference between revisions of "Convert table to track (analysis)"

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;Provider
 
;Provider
 
:[[Institute of Systems Biology]]
 
:[[Institute of Systems Biology]]
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:{{Class|ru.biosoft.bsa.analysis.TableToTrack}}
 
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:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
 
:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]

Revision as of 11:13, 31 May 2013

Analysis title
BSA-Convert-table-to-track-icon.png Convert table to track
Provider
Institute of Systems Biology
Class
TableToTrack
Plugin
ru.biosoft.bsa (Bio-sequences analyses plugin)

Description

This analysis allows you to convert table to track

Parameters:

  • Input table – Table to convert to the track
  • Chromosome (sequence) column – Column where chromosome number is located (either like 'chr1', 'chr:1', 'chr.1' or simply '1')
  • From column – Column where site start coordinate is located
  • To column – Column where site end coordinate is located
  • Sequence collection – Sequences to bind the track to
  • Genome ID string – Something like 'hg18' or 'mm6'
  • Output track – Path where to store the result
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