Difference between revisions of "TreeMap on Functional classification (analysis)"
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;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:Gene-set-analysis-TreeMap-on-Functional-classification-icon.png]] TreeMap on Functional classification |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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==== Description ==== | ==== Description ==== | ||
| − | TreeMap on Functional classification results | + | TreeMap on Functional classification results. |
==== Parameters: ==== | ==== Parameters: ==== | ||
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* '''Similarity''' – A lower value will result in shorter and semantically diverse list | * '''Similarity''' – A lower value will result in shorter and semantically diverse list | ||
* '''Max number to display''' – Maximal number of groups shown on treemap picture | * '''Max number to display''' – Maximal number of groups shown on treemap picture | ||
| + | * '''Only representative''' – Only display parent ontologies for clusters | ||
* '''Output path''' – Output path | * '''Output path''' – Output path | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Gene set analysis (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
TreeMap on Functional classification
- Provider
- Institute of Systems Biology
- Class
TreeMapAnalysis- Plugin
- biouml.plugins.enrichment (Enrichment analysis plugin)
[edit] Description
TreeMap on Functional classification results.
[edit] Parameters:
- Functional classification – Result of Functional classification analysis.
- Species – Species to which analysis should be confined
- P-value column – The result will use selected column in treemap building process.
- Similarity – A lower value will result in shorter and semantically diverse list
- Max number to display – Maximal number of groups shown on treemap picture
- Only representative – Only display parent ontologies for clusters
- Output path – Output path
