Difference between revisions of "Site distribution (analysis)"
From BioUML platform
(Link to plugin page) |
(Automatic synchronization with BioUML) |
||
| (5 intermediate revisions by one user not shown) | |||
| Line 1: | Line 1: | ||
;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:Default-analysis-icon.png]] Site distribution |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
| + | ;Class | ||
| + | :{{Class|biouml.plugins.ensembl.analysis.SiteDistribution}} | ||
;Plugin | ;Plugin | ||
| − | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl | + | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] |
==== Description ==== | ==== Description ==== | ||
| − | Compute distribution of sites around gene boundaries | + | Compute distribution of sites around gene boundaries. |
==== Parameters: ==== | ==== Parameters: ==== | ||
| Line 17: | Line 19: | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Match sites and genes (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Site distribution
- Provider
- Institute of Systems Biology
- Class
SiteDistribution- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
[edit] Description
Compute distribution of sites around gene boundaries.
[edit] Parameters:
- Input track – Input track
- Specie – Specie
- Window width – The width of window around anchor point (transcription start site, transcription end site)
- Output folder – Output folder
