Difference between revisions of "Compare site models (analysis)"

Latest revision as of 18:15, 9 December 2020

Compare site models with ROC curve.

Site models – Site models
Sequences – Sequences containing motifs
Background sequences – Background sequences
Number of permutations (expert) – Number of permutations of the sequences to perform when computing false positive rates
Seed (expert) – Seed for random number generator
Model FDR (expert) – Set models threshold to match specified FDR
Output table – Output table (will be created if not exists)

@@ Line 1: / Line 1: @@
 ;Analysis title
-:[[File:BSA-Compare-site-models-icon.png]] Compare site models
+:[[File:Default-analysis-icon.png]] Compare site models
 ;Provider
 :[[Institute of Systems Biology]]
+;Class
+:{{Class|ru.biosoft.bsa.analysis.motifcompare.MotifCompare}}
 ;Plugin
-:ru.biosoft.bsa (Bio-sequences analyses plugin)
+:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
 ==== Description ====
-Compare site models with ROC curve
+Compare site models with ROC curve.
 ==== Parameters: ====
@@ Line 20: / Line 22: @@
 [[Category:Analyses]]
-[[Category:BSA (analyses group)]]
+[[Category:Motif discovery (analyses group)]]
 [[Category:ISB analyses]]
 [[Category:Autogenerated pages]]