Difference between revisions of "Create profile from gene table (analysis)"
From BioUML platform
(Analysis icon added) |
(Automatic synchronization with BioUML) |
||
| (6 intermediate revisions by one user not shown) | |||
| Line 1: | Line 1: | ||
;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:TF-binding-site-search-Create-profile-from-gene-table-icon.png]] Create profile from gene table |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
| + | ;Class | ||
| + | :{{Class|ru.biosoft.bsa.analysis.createsitemodel.FilterProfileByGeneSet}} | ||
| + | ;Plugin | ||
| + | :[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]] | ||
==== Description ==== | ==== Description ==== | ||
| Line 15: | Line 19: | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:TF binding site search (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Create profile from gene table
- Provider
- Institute of Systems Biology
- Class
FilterProfileByGeneSet- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
[edit] Description
Creates new profile which contains only site models linked to factors from given gene set.
[edit] Parameters:
- Gene set – Table with genes to filter profile by
- Species – Select species
- Reference profile – Site models from this profile which map to genes from gene set will be copied to the result
- Output path – Where to store the result
