Difference between revisions of "Mutation effect (analysis)"
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;Analysis title | ;Analysis title | ||
| − | :[[File: | + | :[[File:Mutations-Mutation-effect-icon.png]] Mutation effect |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
| + | ;Class | ||
| + | :{{Class|biouml.plugins.ensembl.analysis.mutationeffect.Analysis}} | ||
;Plugin | ;Plugin | ||
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | ||
==== Description ==== | ==== Description ==== | ||
| − | Determine effect of mutation on protein | + | Determine effect of mutation on protein. |
==== Parameters: ==== | ==== Parameters: ==== | ||
* '''Input track''' – Track of mutations to process | * '''Input track''' – Track of mutations to process | ||
| + | * '''Properties for track import''' – Properties for track import | ||
| + | ** '''Sequences source''' – Select database to get sequences from or <nowiki>'</nowiki>Custom<nowiki>'</nowiki> to specify sequences location manually | ||
| + | ** '''Sequence collection''' – Specify path to folder containing sequences if <nowiki>'</nowiki>Custom<nowiki>'</nowiki> sequences source is selected | ||
* '''Output track''' – Output track | * '''Output track''' – Output track | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Mutations (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Mutation effect
- Provider
- Institute of Systems Biology
- Class
Analysis- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
[edit] Description
Determine effect of mutation on protein.
[edit] Parameters:
- Input track – Track of mutations to process
- Properties for track import – Properties for track import
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- Output track – Output track
