Difference between revisions of "Annotate track with genes (analysis)"
From BioUML platform
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;Analysis title | ;Analysis title | ||
| − | :[[File:Annotate-track-with-genes | + | :[[File:Match-sites-and-genes-Annotate-track-with-genes-icon.png]] Annotate track with genes |
;Provider | ;Provider | ||
:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
| + | ;Class | ||
| + | :{{Class|biouml.plugins.ensembl.analysis.AnnotateTrackWithGenes}} | ||
;Plugin | ;Plugin | ||
:[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | :[[Biouml.plugins.ensembl (plugin)|biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)]] | ||
==== Description ==== | ==== Description ==== | ||
| − | Add properties to each track site describing genes where this site falls | + | Add properties to each track site describing genes where this site falls. |
==== Parameters: ==== | ==== Parameters: ==== | ||
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[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Match sites and genes (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Annotate track with genes
- Provider
- Institute of Systems Biology
- Class
AnnotateTrackWithGenes- Plugin
- biouml.plugins.ensembl (Support for Ensembl database and Ensembl-specific analyses)
[edit] Description
Add properties to each track site describing genes where this site falls.
[edit] Parameters:
- Input track – Track to annotate
- Species – Taxonomical species
- 5' region size – Include 5' region (promoter) of given size in bp
- 3' region size – Include 3' region of given size in bp
- Output track – Where to store an output
