Difference between revisions of "Count olig frequencies (analysis)"

Latest revision as of 12:19, 25 August 2015

Count olig frequencies in binding regions

Input track – Select input track (it has to contain the merged binding regions; it can be the result of 'Merge binding regions for cell-lines' analysis)
Length of oligs – Length of oligonucleotides
Path to output folder – Output folder will be created under this location when it doesn't exist

@@ Line 1: / Line 1: @@
 ;Analysis title
-:[[File:Binding-regions-Count-olig-frequencies-icon.png]] Count olig frequencies
+:[[File:Default-analysis-icon.png]] Count olig frequencies
 ;Provider
 :[[Institute of Systems Biology]]
 ;Class
-:{{Class|ru.biosoft.bsa.analysis.bindingRegions.CountOligoFrequencies}}
+:{{Class|biouml.plugins.bindingregions.analysis.CountOligoFrequencies}}
 ;Plugin
-:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]]
+:[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]]
 ==== Description ====
@@ Line 13: / Line 13: @@
 ==== Parameters: ====
-* '''Input track''' – Select input ChIP-seq track (must be the result of <nowiki>'</nowiki>Merge binding regions for cell-lines<nowiki>'</nowiki> analysis)
+* '''Input track''' – Select input track (it has to contain the merged binding regions; it can be the result of <nowiki>'</nowiki>Merge binding regions for cell-lines<nowiki>'</nowiki> analysis)
-* '''Length of oligs''' – Length of oligs
+* '''Length of oligs''' – Length of oligonucleotides
-* '''Path to output folder''' – Output folder will be created under this location
+* '''Path to output folder''' – Output folder will be created under this location when it doesn<nowiki>'</nowiki>t exist
 [[Category:Analyses]]