Difference between revisions of "Analysis of Cis-Regulatory Modules (analysis)"
From BioUML platform
m (Protected "Analysis of Cis-Regulatory Modules (analysis)": Autogenerated page ([edit=sysop] (indefinite))) |
(Automatic synchronization with BioUML) |
||
| (11 intermediate revisions by one user not shown) | |||
| Line 1: | Line 1: | ||
| + | ;Analysis title | ||
| + | :[[File:Default-analysis-icon.png]] Analysis of Cis-Regulatory Modules | ||
| + | ;Provider | ||
| + | :[[Institute of Systems Biology]] | ||
| + | ;Class | ||
| + | :{{Class|biouml.plugins.bindingregions.cisregmodule.CisRegModule}} | ||
| + | ;Plugin | ||
| + | :[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]] | ||
| + | |||
==== Parameters: ==== | ==== Parameters: ==== | ||
| Line 11: | Line 20: | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Binding regions (analyses group)]] |
| + | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:14, 9 December 2020
- Analysis title
Analysis of Cis-Regulatory Modules
- Provider
- Institute of Systems Biology
- Class
CisRegModule- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
[edit] Parameters:
- MODE – MODE defines the concrete session of given analysis. The detailed description of MODE see in panel 'Application Log'
- Exp parameters – Exp parameters
- Sequence path – Sequence path
- ChIP-Seq Regions path – ChIP-Seq Regions path
- Sequences path – It is nessecary for determination of Genome Build
- Minimal number of overlaps – Minimally admissible number of overlapped ChIP-Seq regions
- Specie – Specie
- Table path – Path where to save resulting table (includes proper table name
