Difference between revisions of "Biouml.plugins.ensembl (plugin)"
From BioUML platform
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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=== Analysis methods === | === Analysis methods === | ||
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*[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]] | *[[File:BSA-Annotate-track-with-genes-icon.png]] [[Annotate track with genes (analysis)|Annotate track with genes]] | ||
*[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]] | *[[File:Data-Convert-table-via-homology-icon.png]] [[Convert table via homology (analysis)|Convert table via homology]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Count reads in transcripts (analysis)|Count reads in transcripts]] | ||
*[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]] | *[[File:Default-analysis-icon.png]] [[Gene overlap statistics (analysis)|Gene overlap statistics]] | ||
*[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]] | *[[File:BSA-Mutation-effect-icon.png]] [[Mutation effect (analysis)|Mutation effect]] | ||
Revision as of 12:22, 25 August 2015
- ID
- biouml.plugins.ensembl
- Name
- Support for Ensembl database and Ensembl-specific analyses
- Provider
- Institute of Systems Biology
- Version
- 0.9.9
Analysis methods
Analysis methods defined in this plugin:
Annotate track with genes
Convert table via homology
Count reads in transcripts
- Gene overlap statistics
Mutation effect
- Prepare GTF annotation
- Site distribution
Track to gene set
Host objects
JavaScript host objects defined in this plugin:
Reference types
Reference types defined in this plugin:
