Difference between revisions of "Motif quality analysis"

Revision as of 15:24, 4 April 2013

Compute ROC curve of motif model

Parameters:

• Sequences – Track or sequence with motifs
• Site model – Site model
• Number of points – Number of points where sensitivity and FDR will be computed
• Shuffle count – How many times seqeunce letters will be shuffled for FDR estimation
• Seed – Seed for random number generator
• Output path – Path to store results