Difference between revisions of "BioUML user interface"

Revision as of 17:41, 17 May 2013

BioUML web edition interface.

BioUML workbench interface.

In either version the platform has a WIMP graphical user interface.

Both in the BioUML workbench and BioUML web edition the following areas can be found (see the figures):

A — the tabbed repository pane, where you find a collection of Databases, the uploaded Data files and the available Analyses methods (under the corresponding tabs), organized in a hierarchical tree structure. Here you can also see a list of Users involved with the current project.

B — the document pane (aka main pane or workspace), which is the part of the window where contents of projects and databases are viewed and handled. There can be as many tabs in the pane as there are diagrams, workflows, tables etc. opened in the workbench at the moment.

C — the information box containing tabs for the property inspector, which displays information about the data file or analysis method selected in the navigation pane above, and the text search engine.

D — the viewparts area, providing a number of options under the different tabs in a context-dependent manner.

E — the general control panel, the topmost bar showing a context-dependent set of icons for the available operations.

F — the repository pane toolbar containing a set of icons for the available operations depending on the item selected in the tree structure of the navigation pane.

List of icons

• Diagram
• analysis
• collection of sequences
• file
• folder
• galaxy data source method
• galaxy method
• html
• image
• matrix
• matrix library
• module
• profile
• script
• sequence
• site model
• table
• text
• track
• tree-table

Basic operations

See also

• Perspectives