Difference between revisions of "BioUML development roadmap"
From BioUML platform
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For this purpose, please, use the [http://forum.biouml.org/ BioUML forum]. | For this purpose, please, use the [http://forum.biouml.org/ BioUML forum]. | ||
| − | ===Plans for 2013=== | + | ===Plans for 2013-2014=== |
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|v. 0.9.6 | |v. 0.9.6 | ||
| | | | ||
| − | * | + | *BioUML workbench (desktop version) |
| − | ** | + | **integration of Galaxy |
| − | **Antimony support | + | **rule based modelling (implementation of BioNetGen approach, [[BioNetGen|details]]) |
| + | **Antimony support ([[Antimony|details]]) | ||
**Synchronisation between textual and graphical model representation (BioNetGen, Antimony) | **Synchronisation between textual and graphical model representation (BioNetGen, Antimony) | ||
| + | |||
*Interface improvements | *Interface improvements | ||
**display name and actions for table cell values | **display name and actions for table cell values | ||
| + | |||
| + | *R integration | ||
| + | **improved interface and bug fixes | ||
| + | **possibility to call BioUML from R using rbiouml package (http://cran.r-project.org/web/packages/rbiouml) | ||
| + | |||
| + | *JavaScript support (web version) | ||
| + | ** new JavaScript editor, CodeMirror (http://codemirror.net/). | ||
| + | |||
*GTRD database | *GTRD database | ||
**perspective | **perspective | ||
**special start page | **special start page | ||
**improved web interface | **improved web interface | ||
| + | |||
*New methods for analysis of transcription factor binding sites | *New methods for analysis of transcription factor binding sites | ||
| − | |2013, | + | |2013, November |
|- | |- | ||
|v. 0.9.7 | |v. 0.9.7 | ||
| | | | ||
| − | |||
| − | |||
*Server | *Server | ||
**grid version - pilot task manager integration with SGE via DRMAA virtualisation | **grid version - pilot task manager integration with SGE via DRMAA virtualisation | ||
| + | **repository - packages for Red Hat and Debian | ||
| + | **Puppet cookbooks for server updates | ||
*NGS | *NGS | ||
**miRNA | **miRNA | ||
**ribo-seq | **ribo-seq | ||
| − | + | |2013, December | |
| − | |2013, | + | |
|- | |- | ||
|v. 0.9.8 | |v. 0.9.8 | ||
| | | | ||
| − | |||
| − | |||
| − | |||
*Web interface | *Web interface | ||
**mobile version (for web-browser) | **mobile version (for web-browser) | ||
**web interface improvements diagrams - convenient for exchange and editing | **web interface improvements diagrams - convenient for exchange and editing | ||
| − | + | |2014, Q1 | |
| − | + | ||
| − | + | ||
| − | | | + | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
|} | |} | ||
</center> | </center> | ||
Revision as of 01:39, 9 November 2013
This page describes the current plans for BioUML platform development in 2013 and includes a list of desired features that are not scheduled yet. Users, administrators and developers are welcome with their comments and suggestions about new features as well as feature implementation priorities. For this purpose, please, use the BioUML forum.
Plans for 2013-2014
| Release | Description | Date |
|---|---|---|
| v. 0.9.6 |
|
2013, November |
| v. 0.9.7 |
|
2013, December |
| v. 0.9.8 |
|
2014, Q1 |
Other desired features
| Component | Features | Priority |
|---|---|---|
| Core | *Major refactoring: complex, macromolecule state, reaction
|
moderate |
| Databases |
|
low |
| Misc. |
|
low |
