Difference between revisions of "Find miRNA feed forward loops with CMA (analysis)"

Revision as of 16:31, 12 March 2019

Analysis title

Find miRNA feed forward loops with CMA

Provider

geneXplain GmbH

Class

FFLoopCMA

Plugin

biouml.plugins.cma (Composite module analyst)

Description

Find miRNA feed forward loops with CMA

Parameters:

• miRNA CMA Summary – CMA Summary on miRNA sites
• Targets CMA Summary – CMA Summary on miRNA target genes
• miRNA Table – Table with miRBase miRNA symbols
• miRNA TF Sites – Site search result on miRNA promoters
• miRNA Promoters – miRNA promoters regions
• miRNA Scores Table – Table with TargetScan miRNA Scores
• Result Table – Output: Feed forward loops and scores
• Run with test data (expert) – Use test data