SAM or BAM alignment file
From BioUML platform
Revision as of 17:17, 6 June 2013 by BioUML wiki Bot (Talk | contribs)
- File format title
- SAM or BAM alignment file (*.sam, *.bam)
- Element type
track
- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
SAM or BAM alignment file (*.sam, *.bam)
Import SAM/BAM file
Parameters:
- File to import – Specify file from your computer
- Target – Path in repository to put imported file to
- Properties – Additional importer parameters
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- Genome ID string – Something like 'hg18' or 'mm6'
- Create index – Create index (can take a long time)
