Identify enriched motifs in tissue specific tracks (TRANSFAC(R)) (workflow)
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Revision as of 19:02, 13 February 2017 by BioUML wiki Bot (Talk | contribs)
- Workflow title
- Identify enriched motifs in tissue specific tracks (TRANSFAC(R))
- Provider
- geneXplain GmbH
Workflow overview
Parameters
- Input Yes track
- Species
- Sequence source
- CAGE_db
- Tissue_condition
- Select tissue condition
- TSS selction
- Profile
- Filter by Coefficient
- The resulting table "Enriched motifs MEALR" will be filtered by the column Coefficient. The default filter is set to have 75% of true discovery rate, TDR. For 90% TDR, you can set this field to 0,270 and for 50% TDR to 0.05593. The filtered sited are used for the resulting visualization on genome browser.
- Result folder
