Biouml.plugins.genomeenhancer (plugin)

ID

biouml.plugins.genomeenhancer

Name

Genome Enhancer

Provider

Biosoft

Version

0.9.10

Analysis methods

Analysis methods defined in this plugin:

• Add genes from CMA
• Calculate TFs regulatory score
• Calculate keynodes ranks
• Construct composite modules on tracks with keynodes
• Construct composite modules with keynodes
• Find regulatory regions
• Generate dynamic model
• Generate workflow from annotation diagram
• PSD pharmaceutical compounds analysis
• Pharmaceutical Compounds analysis
• Select keynodes with top targets
• Split VCF by regulation

Perspectives

Perspectives defined in this plugin:

• Genome Enhancer
• Platform

Reference types

Reference types defined in this plugin:

• Substances: DrugBank (geneXplain)
• Substances: Pharmaceutical compounds