ChIP-Seq peaks clusterization (analysis)
From BioUML platform
- Analysis title
ChIP-Seq peaks clusterization
- Provider
- Institute of Systems Biology
- Class
ChIPSeqPeaksClusterization- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
clusterization of ChIP-Seq peaks ont the basis of peaks characteristics
Parameters:
- Input track – Select input track (it can be ChIP-seq track from GTRD; thus, it can be the result of MACS or SISSRs peak-finder)
- Type of data transformation – Type of data transformation
- Number of clusters – Number of clusters
- Do add numbers of overlaps – Do add numbers of overlaps to the set of peak characteristics?
- Path to output folder – Output folder will be created under this location when it doesn't exist
