Heterozygous site caller (analysis)
From BioUML platform
- Analysis title
Heterozygous site caller
- Provider
- Institute of Systems Biology
- Class
HeterozygousSiteCaller- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Find heterozygous sites from RNA-seq data.
Parameters:
- Alignment track – BAM track with aligned reads
- Target track – Restrict search to sites from this track
- Min reads – Minimal number of reads at genomic position to be considered
- Minimal fraction of second allele – Minimal fraction of second allele
- Output track – Output track
