MicroRNA finder (analysis)

Finds novel microRNA from genomic alignments of NGS reads.

Alignments – Genomic alignments of microRNA reads
Genome – Reference genome used for alignment
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
Minimal cluster size – Minimal number of reads in cluster
Maximum read distance – Maxim distance between adjacent reads in cluster
Clusters – Resulting read clusters
Primary isoforms – Resulting primary microRNA isoforms
Longest isoforms – Resulting longest microRNA isoforms