Reads to matrices (workflow)

Workflow title

Reads to matrices

Provider

Autosome.Ru

Workflow overview

Description

This workflow allows you to upload BED file which contains aligned reads, run the MACS peak finder, remove too short peaks and run ChIPMunk analysis to predict the motifs.

Parameters

Experiment track (BED)

BED file containing experimental data

Control track (BED)

BED file containing control reads

Sequences source

Select Ensembl version which corresponds to your input data

Output folder

Folder to store output