Difference between revisions of "Ru.biosoft.analysis (plugin)"
From BioUML platform
(Automatic synchronization with BioUML) |
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
;Version | ;Version | ||
− | :0.9. | + | :0.9.10 |
=== Extension points === | === Extension points === | ||
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*[[File:Data-Affymetrix-normalization-icon.png]] [[Affymetrix normalization (analysis)|Affymetrix normalization]] | *[[File:Data-Affymetrix-normalization-icon.png]] [[Affymetrix normalization (analysis)|Affymetrix normalization]] | ||
*[[File:Data-Agilent-normalization-icon.png]] [[Agilent normalization (analysis)|Agilent normalization]] | *[[File:Data-Agilent-normalization-icon.png]] [[Agilent normalization (analysis)|Agilent normalization]] | ||
− | *[[File: | + | *[[File:Data-Annotate-diagram-icon.png]] [[Annotate diagram (analysis)|Annotate diagram]] |
*[[File:Data-Annotate-table-icon.png]] [[Annotate table (analysis)|Annotate table]] | *[[File:Data-Annotate-table-icon.png]] [[Annotate table (analysis)|Annotate table]] | ||
*[[File:Data-CRC-Analysis-icon.png]] [[CRC Analysis]] | *[[File:Data-CRC-Analysis-icon.png]] [[CRC Analysis]] | ||
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*[[File:Data-Create-folder-icon.png]] [[Create folder (analysis)|Create folder]] | *[[File:Data-Create-folder-icon.png]] [[Create folder (analysis)|Create folder]] | ||
*[[File:Default-analysis-icon.png]] [[Diagram graph compare analysis]] | *[[File:Default-analysis-icon.png]] [[Diagram graph compare analysis]] | ||
− | *[[File: | + | *[[File:Statistics-Differential-expression-with-DESeq-icon.png]] [[Differential expression with DESeq (analysis)|Differential expression with DESeq]] |
*[[File:Admin-Export-element-icon.png]] [[Export element (analysis)|Export element]] | *[[File:Admin-Export-element-icon.png]] [[Export element (analysis)|Export element]] | ||
*[[File:Molecular-networks-Extend-network-icon.png]] [[Extend network (analysis)|Extend network]] | *[[File:Molecular-networks-Extend-network-icon.png]] [[Extend network (analysis)|Extend network]] | ||
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*[[File:ReferenceType-ProbeTableType-icon.png]] [[Probes (reference type)|Probes]] | *[[File:ReferenceType-ProbeTableType-icon.png]] [[Probes (reference type)|Probes]] | ||
*[[File:ReferenceType-ProteinTableType-icon.png]] [[Proteins (reference type)|Proteins]] | *[[File:ReferenceType-ProteinTableType-icon.png]] [[Proteins (reference type)|Proteins]] | ||
+ | *[[File:ReferenceType-SubstanceType-icon.png]] [[Substances (reference type)|Substances]] | ||
*[[File:ReferenceType-TranscriptTableType-icon.png]] [[Transcripts (reference type)|Transcripts]] | *[[File:ReferenceType-TranscriptTableType-icon.png]] [[Transcripts (reference type)|Transcripts]] | ||
Revision as of 19:03, 13 February 2017
- ID
- ru.biosoft.analysis
- Name
- Common methods of data analysis plug-in
- Provider
- Institute of Systems Biology
- Version
- 0.9.10
Contents[hide] |
Extension points
Extension points defined in this plugin:
Analysis methods
Analysis methods defined in this plugin:
Affymetrix normalization
Agilent normalization
Annotate diagram
Annotate table
CRC Analysis
Check quotas
Clean up SQL database
Cluster analysis by K-means
Convert table
Copy data element
Copy folder
Correlation Analysis
Create folder
Diagram graph compare analysis
Differential expression with DESeq
Export element
Extend network
Filter duplicate rows
Filter table
Fold-Change calculation
Group table rows
Hypergeometric analysis
Illumina normalization
Join diagrams
Join several tables
Join table
Meta analysis
Polynomial Regression analysis
Remove unobservable molecules
Select table columns
Share molecules
Up and Down Identification
Venn diagrams
Host objects
JavaScript host objects defined in this plugin:
Reference types
Reference types defined in this plugin: