Difference between revisions of "Heterozygous site caller (analysis)"
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| − | :[[File:Heterozygous-site-caller | + | :[[File:BSA-Heterozygous-site-caller-icon.png]] Heterozygous site caller |
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
Revision as of 12:40, 16 May 2013
- Analysis title
- File:BSA-Heterozygous-site-caller-icon.png Heterozygous site caller
- Provider
- Institute of Systems Biology
- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Find heterozygous sites from RNA-seq data
Parameters:
- Alignment track – BAM track with aligned reads
- Target track – Restrict search to sites from this track
- Min reads – Minimal number of reads at genomic position to be considered
- Minimal fraction of second allele – Minimal fraction of second allele
- Output track – Output track
