Difference between revisions of "Heterozygous site caller (analysis)"
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==== Description ==== | ==== Description ==== | ||
| − | Find heterozygous sites from RNA-seq data | + | Find heterozygous sites from RNA-seq data. |
==== Parameters: ==== | ==== Parameters: ==== | ||
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[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:Mutations (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Heterozygous site caller
- Provider
- Institute of Systems Biology
- Class
HeterozygousSiteCaller- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
[edit] Description
Find heterozygous sites from RNA-seq data.
[edit] Parameters:
- Alignment track – BAM track with aligned reads
- Target track – Restrict search to sites from this track
- Min reads – Minimal number of reads at genomic position to be considered
- Minimal fraction of second allele – Minimal fraction of second allele
- Output track – Output track
