Difference between revisions of "ChIP-Seq peaks clusterization (analysis)"
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* '''Number of clusters''' – Number of clusters | * '''Number of clusters''' – Number of clusters | ||
* '''Do add numbers of overlaps''' – Do add numbers of overlaps to the set of peak characteristics? | * '''Do add numbers of overlaps''' – Do add numbers of overlaps to the set of peak characteristics? | ||
| − | * '''Path to output folder''' – Output folder will be created under this location | + | * '''Path to output folder''' – Output folder will be created under this location when it doesn<nowiki>'</nowiki>t exist |
[[Category:Analyses]] | [[Category:Analyses]] | ||
Revision as of 12:19, 25 August 2015
- Analysis title
ChIP-Seq peaks clusterization
- Provider
- Institute of Systems Biology
- Class
ChIPSeqPeaksClusterization- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
clusterization of ChIP-Seq peaks ont the basis of peaks characteristics
Parameters:
- Input track – Select input ChIP-seq track (must be the result of MACS or SISSRs analysis)
- Type of data transformation – Type of data transformation
- Number of clusters – Number of clusters
- Do add numbers of overlaps – Do add numbers of overlaps to the set of peak characteristics?
- Path to output folder – Output folder will be created under this location when it doesn't exist
